Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928870.1_cds_XP_016476335.1_68177
CDS Infomation

[gene=LOC107797927] [db_xref=GeneID:107797927] [protein=pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like] [protein_id=XP_016476335.1] [location=complement(join(14214..14491,15507..16287,17360..17617))] [gbkey=CDS]
Sequence

ATGGCTACCTCTTTTTCTGCTACAAAACTCTTACAACCTTTGCCTCCTCTAAACTCCAGT
GCCAGATCCACTGATAAGAATACCCTTATGAGTAATCAGTTTAAAGACAGCTCCTTTTTT
CTTGGATCAACCCATAAACTCTCTTTAAAAAAACCCTTTTTGCCTCCTCACTCACAACGT
CGATCCAAACCTGTTTTTGCTGTTTCCGAGGTTGTAAAAGACAAGAAGCTCAAAAATGAT
TCCTCCCTCTCCAATCTGTTAATTACCAAAGAGGAAGGATTGGAGTTGTACGAGGACATG
GTTCTTGGAAGAGCCTTTGAGGACATGTGTGCCCAAATGTATTACAGGGGAAAAATGTTT
GGTTTTGTGCATTTGTACAATGGCCAAGAAGCAGTCTCCACTGGCTTCATTAAGCTATTG
AAGAAAGAGGACTCAGTGGTTAGCACTTATCGTGATCACGTCCACGCGTTGAGCAAAGGG
GTTCCGGCACGTCAAGTGATGAGCGAGCTCTTTGGGAAGACCACTGGCTGTTGCAGAGGC
CAAGGTGGTTCCATGCACATGTTCTCGAAAGAACACAACGTTCTAGGCGGTTTCGCTTTC
ATTGGTGAGGGTATCCCTGTGGCGACAGGTGCTGCCTTCACTAGCAAGTATAAAAGGGAG
GTACTGAAAGAGGCAGACTGTGATCACGTAACTATGGCCTTCTTTGGTGATGGAACTTGC
AACAATGGCCAGTTCTTTGAGTGCTTGAACATGGCTGCACTATGGAAGTTGCCCATTATT
TTTGTTGTTGAGAACAATTTGTGGGCAATTGGCATGTCCCACTTGAGGGCAACTTCTGAT
CCTGAAATTTGGAAGAAAGGTCCTGCCTTCGGGATGCCTGGGGTTCACGTTGATGGCATG
GATGTGTTGAAGGTGAGGGAGGTAGCAAAGGAAGCTGTTGCACGAGCTAGGAGAGGCGAC
GGTCCCACTCTTGTTGAGTGTGAGACCTACCGGTTTAGAGGACACTCTTTGGCTGATCCA
GATGAGCTTCGTGACCCTGCTGAAAAGAACCATTATGCTGCCCGAGATCCTATCAGTGCC
TTGAAGAAGTATATGTTTGAGAACAACCTAGTCAATGAAGCAGAGTTGAAGGCCATTGAT
AAGAGGATTGATGAGCTGGTTGAAGATGCTGTTGAGTTTGCAGATGAAAGCCCTCATCCT
GTTCGTAGCCAGCTGCTAGAGAACGTATTTGCCGATCCAAGGGGCTTTGGAATTGGGCCT
GATGGAAGGTACAGATGTGAGGATCCCAAGTTCACTGAAGGCACTGCTCATGTCTAG

Peptide Sequence

PEP ID

XP_016476335.1
PEP Infomation

PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [Nicotiana tabacum]
Sequence

MATSFSATKLLQPLPPLNSSARSTDKNTLMSNQFKDSSFFLGSTHKLSLKKPFLPPHSQR
RSKPVFAVSEVVKDKKLKNDSSLSNLLITKEEGLELYEDMVLGRAFEDMCAQMYYRGKMF
GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRG
QGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKYKREVLKEADCDHVTMAFFGDGTC
NNGQFFECLNMAALWKLPIIFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGM
DVLKVREVAKEAVARARRGDGPTLVECETYRFRGHSLADPDELRDPAEKNHYAARDPISA
LKKYMFENNLVNEAELKAIDKRIDELVEDAVEFADESPHPVRSQLLENVFADPRGFGIGP
DGRYRCEDPKFTEGTAHV

Transcript Sequence

Gene sequence data has not been registered.